Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nhlrc4Q3UP44 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm8199-201ENSMUST00000121323 823 ntBASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm8100-201ENSMUST00000182906 988 ntBASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Gm7940-201ENSMUST00000218195 769 ntBASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nhlrc4Q3UP44 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm12501-201ENSMUST00000119163 529 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm11450-201ENSMUST00000121144 333 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm18734-201ENSMUST00000172937 808 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Mir8093-201ENSMUST00000185043 137 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm5714-201ENSMUST00000197343 566 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm2965-201ENSMUST00000198365 343 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm4482-201ENSMUST00000200876 742 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Gm45113-201ENSMUST00000207518 165 ntBASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nhlrc4Q3UP44 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms