Protein–RNA interactions for Protein: Q0GGX2

Znf541, Zinc finger protein 541, mousemouse

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf541Q0GGX2 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Znf541Q0GGX2 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm11667-201ENSMUST00000119828 486 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm19246-201ENSMUST00000173599 255 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm10109-202ENSMUST00000206890 1211 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm44551-201ENSMUST00000208804 171 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm37600-201ENSMUST00000193764 3292 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm43127-201ENSMUST00000195890 2789 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Znf541Q0GGX2 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Gm22846-201ENSMUST00000157706 270 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Gm30946-201ENSMUST00000198288 724 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 AC115122.1-201ENSMUST00000224850 1040 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Gm6430-201ENSMUST00000054664 1248 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Znf541Q0GGX2 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.85□□□□□ -0.03
Znf541Q0GGX2 Gm14460-201ENSMUST00000121511 639 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms