Protein–RNA interactions for Protein: Q08874

Mitf, Microphthalmia-associated transcription factor, mousemouse

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MitfQ08874 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
MitfQ08874 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
MitfQ08874 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
MitfQ08874 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.94□□□□□ -0.66
MitfQ08874 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
MitfQ08874 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.94□□□□□ -0.66
MitfQ08874 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm27731-201ENSMUST00000185192 107 ntBASIC10.94□□□□□ -0.66
MitfQ08874 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm29127-201ENSMUST00000188304 517 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm45925-201ENSMUST00000218882 744 ntBASIC10.94□□□□□ -0.66
MitfQ08874 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.94□□□□□ -0.66
MitfQ08874 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.94□□□□□ -0.66
MitfQ08874 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
MitfQ08874 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
MitfQ08874 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
MitfQ08874 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.93□□□□□ -0.66
MitfQ08874 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
MitfQ08874 Gm23912-201ENSMUST00000104687 87 ntBASIC10.93□□□□□ -0.66
MitfQ08874 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
MitfQ08874 Gm13342-201ENSMUST00000121055 207 ntBASIC10.93□□□□□ -0.66
MitfQ08874 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.93□□□□□ -0.66
MitfQ08874 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC10.93□□□□□ -0.66
MitfQ08874 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC10.93□□□□□ -0.66
MitfQ08874 Gm45930-201ENSMUST00000221330 292 ntBASIC10.93□□□□□ -0.66
MitfQ08874 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.93□□□□□ -0.66
MitfQ08874 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
MitfQ08874 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
MitfQ08874 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
MitfQ08874 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms