Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Mir1938-201ENSMUST00000158746 100 ntBASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm20482-202ENSMUST00000174729 825 ntBASIC11.92□□□□□ -0.5
Pfdn6Q03958 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm32999-201ENSMUST00000192693 562 ntBASIC11.92□□□□□ -0.5
Pfdn6Q03958 Rprl1-202ENSMUST00000198476 238 ntBASIC11.92□□□□□ -0.5
Pfdn6Q03958 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Cts7-204ENSMUST00000225321 1257 ntBASIC11.92□□□□□ -0.5
Pfdn6Q03958 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.92□□□□□ -0.5
Pfdn6Q03958 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Pfdn6Q03958 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm15276-201ENSMUST00000145953 498 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm43822-201ENSMUST00000200285 476 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gzmn-202ENSMUST00000225535 989 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Pfdn6Q03958 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.91□□□□□ -0.5
Pfdn6Q03958 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.9□□□□□ -0.5
Pfdn6Q03958 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Pfdn6Q03958 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms