Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.19□□□□□ -0.3
Tpm1P58771 Gm27682-201ENSMUST00000183930 110 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 Gm37201-201ENSMUST00000191845 523 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Gm18711-201ENSMUST00000199341 750 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 Gm43818-201ENSMUST00000200605 466 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.19□□□□□ -0.3
Tpm1P58771 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.19□□□□□ -0.3
Tpm1P58771 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC13.19□□□□□ -0.3
Tpm1P58771 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tpm1P58771 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tpm1P58771 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tpm1P58771 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tpm1P58771 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Tpm1P58771 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tpm1P58771 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Tpm1P58771 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Tpm1P58771 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tpm1P58771 AC153506.1-201ENSMUST00000218768 2915 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Tpm1P58771 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Tpm1P58771 AC159195.3-201ENSMUST00000225162 2211 ntBASIC13.19□□□□□ -0.3
Tpm1P58771 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Tpm1P58771 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tpm1P58771 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm21136-201ENSMUST00000186812 2575 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Gm6605-201ENSMUST00000031488 2574 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm14999-201ENSMUST00000121039 624 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.18□□□□□ -0.3
Tpm1P58771 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.18□□□□□ -0.3
Tpm1P58771 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm7561-201ENSMUST00000211203 886 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.18□□□□□ -0.3
Tpm1P58771 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.18□□□□□ -0.3
Tpm1P58771 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Tpm1P58771 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 Gm42141-201ENSMUST00000196534 2172 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC13.18□□□□□ -0.3
Tpm1P58771 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Tpm1P58771 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Tpm1P58771 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.17□□□□□ -0.3
Tpm1P58771 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm12138-201ENSMUST00000122180 951 ntBASIC13.17□□□□□ -0.3
Tpm1P58771 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.17□□□□□ -0.3
Tpm1P58771 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Tpm1P58771 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.17□□□□□ -0.3
Tpm1P58771 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.17□□□□□ -0.3
Tpm1P58771 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Tpm1P58771 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms