Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.9□□□□□ -0.5
SmoP56726 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SmoP56726 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SmoP56726 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SmoP56726 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
SmoP56726 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SmoP56726 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.9□□□□□ -0.5
SmoP56726 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
SmoP56726 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.89□□□□□ -0.51
SmoP56726 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.89□□□□□ -0.51
SmoP56726 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.89□□□□□ -0.51
SmoP56726 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.89□□□□□ -0.51
SmoP56726 Gm22902-201ENSMUST00000158488 302 ntBASIC11.89□□□□□ -0.51
SmoP56726 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SmoP56726 Gm29499-201ENSMUST00000189151 486 ntBASIC11.89□□□□□ -0.51
SmoP56726 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Gm28329-201ENSMUST00000191208 689 ntBASIC11.89□□□□□ -0.51
SmoP56726 Gm29171-201ENSMUST00000191397 486 ntBASIC11.89□□□□□ -0.51
SmoP56726 Gm38151-201ENSMUST00000195085 289 ntBASIC11.89□□□□□ -0.51
SmoP56726 Gm5982-201ENSMUST00000196234 512 ntBASIC11.89□□□□□ -0.51
SmoP56726 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.89□□□□□ -0.51
SmoP56726 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
SmoP56726 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.89□□□□□ -0.51
SmoP56726 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
SmoP56726 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
SmoP56726 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.88□□□□□ -0.51
SmoP56726 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Gm14193-201ENSMUST00000105067 153 ntBASIC11.88□□□□□ -0.51
SmoP56726 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.88□□□□□ -0.51
SmoP56726 Gm7666-201ENSMUST00000146631 819 ntBASIC11.88□□□□□ -0.51
SmoP56726 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.88□□□□□ -0.51
SmoP56726 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 Mir6546-201ENSMUST00000184460 62 ntBASIC11.88□□□□□ -0.51
SmoP56726 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.88□□□□□ -0.51
SmoP56726 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.88□□□□□ -0.51
SmoP56726 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
SmoP56726 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.88□□□□□ -0.51
SmoP56726 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.88□□□□□ -0.51
SmoP56726 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.88□□□□□ -0.51
SmoP56726 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
SmoP56726 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
SmoP56726 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms