Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lim2P56563 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Lim2P56563 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.84□□□□□ -0.51
Lim2P56563 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lim2P56563 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
Lim2P56563 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Lim2P56563 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Gm23596-201ENSMUST00000104304 132 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Gm11509-201ENSMUST00000117358 325 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC11.84□□□□□ -0.51
Lim2P56563 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.84□□□□□ -0.51
Lim2P56563 Gm25732-201ENSMUST00000175168 60 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Mir7070-201ENSMUST00000183657 86 ntBASIC11.84□□□□□ -0.51
Lim2P56563 AU022133-201ENSMUST00000200601 873 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.84□□□□□ -0.51
Lim2P56563 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.84□□□□□ -0.51
Lim2P56563 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lim2P56563 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Lim2P56563 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Lim2P56563 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Lim2P56563 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Lim2P56563 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.83□□□□□ -0.52
Lim2P56563 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Gm11660-201ENSMUST00000120955 412 ntBASIC11.83□□□□□ -0.52
Lim2P56563 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Gm3332-201ENSMUST00000189337 928 ntBASIC11.83□□□□□ -0.52
Lim2P56563 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.83□□□□□ -0.52
Lim2P56563 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 AC133602.1-201ENSMUST00000227510 509 ntBASIC11.83□□□□□ -0.52
Lim2P56563 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.83□□□□□ -0.52
Lim2P56563 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.83□□□□□ -0.52
Lim2P56563 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lim2P56563 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lim2P56563 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lim2P56563 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lim2P56563 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lim2P56563 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Lim2P56563 Gm15004-201ENSMUST00000119192 630 ntBASIC11.82□□□□□ -0.52
Lim2P56563 Gm14441-201ENSMUST00000121960 540 ntBASIC11.82□□□□□ -0.52
Lim2P56563 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.82□□□□□ -0.52
Lim2P56563 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Lim2P56563 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11.82□□□□□ -0.52
Lim2P56563 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC11.82□□□□□ -0.52
Lim2P56563 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lim2P56563 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Lim2P56563 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.82□□□□□ -0.52
Lim2P56563 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lim2P56563 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms