Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC14.94□□□□□ -0.02
Msh6P54276 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Gm10807-201ENSMUST00000177134 795 ntBASIC14.94□□□□□ -0.02
Msh6P54276 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC14.94□□□□□ -0.02
Msh6P54276 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.94□□□□□ -0.02
Msh6P54276 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC14.94□□□□□ -0.02
Msh6P54276 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Msh6P54276 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Msh6P54276 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Gm5805-201ENSMUST00000072779 456 ntBASIC14.94□□□□□ -0.02
Msh6P54276 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Msh6P54276 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Msh6P54276 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.93□□□□□ -0.02
Msh6P54276 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC14.93□□□□□ -0.02
Msh6P54276 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Gm8574-201ENSMUST00000203207 924 ntBASIC14.93□□□□□ -0.02
Msh6P54276 AC159376.1-201ENSMUST00000218504 630 ntBASIC14.93□□□□□ -0.02
Msh6P54276 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.93□□□□□ -0.02
Msh6P54276 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Msh6P54276 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Msh6P54276 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.92□□□□□ -0.02
Msh6P54276 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.92□□□□□ -0.02
Msh6P54276 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC14.92□□□□□ -0.02
Msh6P54276 Gm4862-201ENSMUST00000170405 438 ntBASIC14.92□□□□□ -0.02
Msh6P54276 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.92□□□□□ -0.02
Msh6P54276 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC14.92□□□□□ -0.02
Msh6P54276 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 AC126799.1-201ENSMUST00000221976 246 ntBASIC14.92□□□□□ -0.02
Msh6P54276 AC140375.1-201ENSMUST00000225421 694 ntBASIC14.92□□□□□ -0.02
Msh6P54276 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.92□□□□□ -0.02
Msh6P54276 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.92□□□□□ -0.02
Msh6P54276 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Msh6P54276 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Msh6P54276 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms