Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.74□□□□□ -0.21
Traf1P39428 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Traf1P39428 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.74□□□□□ -0.21
Traf1P39428 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Traf1P39428 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Traf1P39428 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Traf1P39428 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Traf1P39428 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Traf1P39428 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Traf1P39428 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Cog3-203ENSMUST00000227473 4197 ntBASIC13.73□□□□□ -0.21
Traf1P39428 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC13.73□□□□□ -0.21
Traf1P39428 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.73□□□□□ -0.21
Traf1P39428 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Gm7467-201ENSMUST00000185173 652 ntBASIC13.73□□□□□ -0.21
Traf1P39428 Gm43916-201ENSMUST00000205062 967 ntBASIC13.73□□□□□ -0.21
Traf1P39428 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.73□□□□□ -0.21
Traf1P39428 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 CT009718.3-201ENSMUST00000221116 367 ntBASIC13.73□□□□□ -0.21
Traf1P39428 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Traf1P39428 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Traf1P39428 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.72□□□□□ -0.21
Traf1P39428 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Traf1P39428 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Gm9034-201ENSMUST00000182071 1005 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Gm29499-201ENSMUST00000189151 486 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Gm28329-201ENSMUST00000191208 689 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Gm29171-201ENSMUST00000191397 486 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Gm17931-201ENSMUST00000208132 634 ntBASIC13.72□□□□□ -0.21
Traf1P39428 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.72□□□□□ -0.21
Traf1P39428 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Traf1P39428 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Traf1P39428 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Traf1P39428 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.71□□□□□ -0.21
Traf1P39428 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Traf1P39428 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Traf1P39428 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.71□□□□□ -0.21
Traf1P39428 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Traf1P39428 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.71□□□□□ -0.21
Traf1P39428 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.71□□□□□ -0.21
Traf1P39428 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms