Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.88□□□□□ -0.67
Nedd8P29595 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.88□□□□□ -0.67
Nedd8P29595 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.88□□□□□ -0.67
Nedd8P29595 Gm10686-201ENSMUST00000215389 3247 ntBASIC10.88□□□□□ -0.67
Nedd8P29595 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Spata33-207ENSMUST00000212760 4074 ntBASIC10.88□□□□□ -0.67
Nedd8P29595 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.88□□□□□ -0.67
Nedd8P29595 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.88□□□□□ -0.67
Nedd8P29595 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC10.88□□□□□ -0.67
Nedd8P29595 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nedd8P29595 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Nedd8P29595 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Nedd8P29595 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 Gm13315-201ENSMUST00000120376 991 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 Gm15429-201ENSMUST00000151268 798 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 Gm27331-201ENSMUST00000183705 60 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 Gm44958-201ENSMUST00000203734 736 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 Gm18307-201ENSMUST00000206864 949 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 AW822252-206ENSMUST00000208904 237 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.87□□□□□ -0.67
Nedd8P29595 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.87□□□□□ -0.67
Nedd8P29595 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nedd8P29595 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nedd8P29595 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.86□□□□□ -0.67
Nedd8P29595 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nedd8P29595 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Nedd8P29595 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.86□□□□□ -0.67
Nedd8P29595 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nedd8P29595 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Nedd8P29595 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Nedd8P29595 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.86□□□□□ -0.67
Nedd8P29595 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.86□□□□□ -0.67
Nedd8P29595 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Nedd8P29595 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.86□□□□□ -0.67
Nedd8P29595 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.86□□□□□ -0.67
Nedd8P29595 AC133598.3-202ENSMUST00000224219 531 ntBASIC10.86□□□□□ -0.67
Nedd8P29595 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Nedd8P29595 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms