Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
PtcraP0C6B2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Gm11700-201ENSMUST00000119409 403 ntBASIC10.33□□□□□ -0.76
PtcraP0C6B2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Gm18212-201ENSMUST00000211678 889 ntBASIC10.33□□□□□ -0.76
PtcraP0C6B2 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
PtcraP0C6B2 Gm42941-201ENSMUST00000200347 1321 ntBASIC10.33□□□□□ -0.76
PtcraP0C6B2 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.33□□□□□ -0.76
PtcraP0C6B2 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm23949-201ENSMUST00000104027 127 ntBASIC10.32□□□□□ -0.76
PtcraP0C6B2 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm24749-201ENSMUST00000157838 343 ntBASIC10.32□□□□□ -0.76
PtcraP0C6B2 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm38314-201ENSMUST00000195709 625 ntBASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm44262-201ENSMUST00000204969 372 ntBASIC10.32□□□□□ -0.76
PtcraP0C6B2 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.32□□□□□ -0.76
PtcraP0C6B2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
PtcraP0C6B2 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms