Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
IghmP01872 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
IghmP01872 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.06□□□□□ -0.64
IghmP01872 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.06□□□□□ -0.64
IghmP01872 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.06□□□□□ -0.64
IghmP01872 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IghmP01872 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.05□□□□□ -0.64
IghmP01872 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
IghmP01872 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
IghmP01872 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.05□□□□□ -0.64
IghmP01872 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.05□□□□□ -0.64
IghmP01872 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.05□□□□□ -0.64
IghmP01872 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.05□□□□□ -0.64
IghmP01872 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
IghmP01872 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
IghmP01872 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IghmP01872 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
IghmP01872 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
IghmP01872 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.04□□□□□ -0.64
IghmP01872 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.04□□□□□ -0.64
IghmP01872 AA914427-201ENSMUST00000193194 1166 ntBASIC11.04□□□□□ -0.64
IghmP01872 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.04□□□□□ -0.64
IghmP01872 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.04□□□□□ -0.64
IghmP01872 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IghmP01872 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.04□□□□□ -0.64
IghmP01872 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms