Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
ClppO88696 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.67□□□□□ -0.54
ClppO88696 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Gm11298-201ENSMUST00000120503 1799 ntBASIC11.67□□□□□ -0.54
ClppO88696 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
ClppO88696 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.67□□□□□ -0.54
ClppO88696 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ClppO88696 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.66□□□□□ -0.54
ClppO88696 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm22133-201ENSMUST00000102082 109 ntBASIC11.66□□□□□ -0.54
ClppO88696 Gm23949-201ENSMUST00000104027 127 ntBASIC11.66□□□□□ -0.54
ClppO88696 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm14263-201ENSMUST00000117955 746 ntBASIC11.66□□□□□ -0.54
ClppO88696 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
ClppO88696 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.66□□□□□ -0.54
ClppO88696 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
ClppO88696 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.66□□□□□ -0.54
ClppO88696 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
ClppO88696 Gm7848-201ENSMUST00000210739 718 ntBASIC11.66□□□□□ -0.54
ClppO88696 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.66□□□□□ -0.54
ClppO88696 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.66□□□□□ -0.54
ClppO88696 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.66□□□□□ -0.54
ClppO88696 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ClppO88696 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ClppO88696 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
ClppO88696 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.65□□□□□ -0.54
ClppO88696 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
ClppO88696 Gm11331-201ENSMUST00000119764 288 ntBASIC11.65□□□□□ -0.54
ClppO88696 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.65□□□□□ -0.54
ClppO88696 Gm9022-201ENSMUST00000182482 992 ntBASIC11.65□□□□□ -0.54
ClppO88696 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.65□□□□□ -0.54
ClppO88696 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.65□□□□□ -0.54
ClppO88696 Gm7003-201ENSMUST00000195089 312 ntBASIC11.65□□□□□ -0.54
ClppO88696 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.65□□□□□ -0.54
ClppO88696 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.65□□□□□ -0.54
ClppO88696 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ClppO88696 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
ClppO88696 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.65□□□□□ -0.54
ClppO88696 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
ClppO88696 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
ClppO88696 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
ClppO88696 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms