Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm23270-201ENSMUST00000104055 131 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm11439-201ENSMUST00000118598 409 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm14723-201ENSMUST00000118686 215 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm44364-201ENSMUST00000198368 141 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm43179-201ENSMUST00000198797 275 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm43822-201ENSMUST00000200285 476 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Lect2-202ENSMUST00000225183 823 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdh9F8VPK8 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm6963-201ENSMUST00000147879 379 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm38341-201ENSMUST00000195357 515 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm8956-201ENSMUST00000203939 825 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm3961-201ENSMUST00000204425 994 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm4607-201ENSMUST00000206649 577 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh9F8VPK8 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdh9F8VPK8 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms