Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Gm13611-201ENSMUST00000118269 318 ntBASIC12.73□□□□□ -0.37
Clca3bE9PUL3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.73□□□□□ -0.37
Clca3bE9PUL3 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm13408-201ENSMUST00000119822 798 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm13935-201ENSMUST00000121859 798 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm9211-201ENSMUST00000182882 975 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm37986-201ENSMUST00000193285 383 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Clca3bE9PUL3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm15432-201ENSMUST00000121106 195 ntBASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm7666-201ENSMUST00000146631 819 ntBASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm24844-201ENSMUST00000158679 127 ntBASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm10807-201ENSMUST00000177134 795 ntBASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Clca3bE9PUL3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms