Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm12957-201ENSMUST00000117835 377 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm12363-201ENSMUST00000122250 668 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm27514-201ENSMUST00000183692 110 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm37424-201ENSMUST00000191727 561 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Igkv2-116-201ENSMUST00000199327 362 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm43999-201ENSMUST00000204286 2889 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav6n-6A0A075B6B2 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ccdc33-201ENSMUST00000042205 2632 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm8793-201ENSMUST00000183069 1303 ntBASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Mir1247-201ENSMUST00000116706 82 ntBASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 AC140451.2-201ENSMUST00000228030 664 ntBASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC8.85□□□□□ -0.99
Trav6n-6A0A075B6B2 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms