Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gm6222-202ENSMUST00000182143 629 ntBASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gm27839-201ENSMUST00000184242 106 ntBASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gm807-202ENSMUST00000224929 408 ntBASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Upk1bQ9Z2C6 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gm15806-201ENSMUST00000120696 955 ntBASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gm6114-201ENSMUST00000182472 968 ntBASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Upk1bQ9Z2C6 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Gm37580-201ENSMUST00000192408 2800 ntBASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.96□□□□□ -0.66
Upk1bQ9Z2C6 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Upk1bQ9Z2C6 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms