Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nop56Q9D6Z1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Nop56Q9D6Z1 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Gm14928-201ENSMUST00000120198 477 ntBASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Gm45574-201ENSMUST00000210921 331 ntBASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nop56Q9D6Z1 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm23912-201ENSMUST00000104687 87 ntBASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm27847-201ENSMUST00000183711 107 ntBASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm27375-201ENSMUST00000183799 107 ntBASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm10268-201ENSMUST00000085340 555 ntBASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nop56Q9D6Z1 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms