Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Sf3b1Q99NB9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm4726-201ENSMUST00000135604 736 ntBASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm6019-201ENSMUST00000148369 736 ntBASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm27438-201ENSMUST00000183480 110 ntBASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm35960-201ENSMUST00000202712 767 ntBASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sf3b1Q99NB9 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm12579-201ENSMUST00000118040 783 ntBASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm8731-201ENSMUST00000118088 412 ntBASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm9540-201ENSMUST00000188230 478 ntBASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sf3b1Q99NB9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3b1Q99NB9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sf3b1Q99NB9 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.58□□□□□ -0.39
Sf3b1Q99NB9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sf3b1Q99NB9 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 765.9 ms