Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.4
Clp1Q99LI9 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.52□□□□□ -0.4
Clp1Q99LI9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm14807-201ENSMUST00000116640 983 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm37826-201ENSMUST00000195329 322 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm42816-201ENSMUST00000198433 325 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm18514-201ENSMUST00000218980 436 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.52□□□□□ -0.41
Clp1Q99LI9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Clp1Q99LI9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm25545-201ENSMUST00000122673 323 ntBASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.51□□□□□ -0.41
Clp1Q99LI9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.51□□□□□ -0.41
Clp1Q99LI9 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm16380-201ENSMUST00000077997 478 ntBASIC12.51□□□□□ -0.41
Clp1Q99LI9 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Clp1Q99LI9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.5□□□□□ -0.41
Clp1Q99LI9 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clp1Q99LI9 Mir8093-201ENSMUST00000185043 137 ntBASIC12.5□□□□□ -0.41
Clp1Q99LI9 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms