Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Rprl1-201ENSMUST00000158050 327 ntBASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm17827-201ENSMUST00000211825 742 ntBASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ddx41Q91VN6 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Ddx41Q91VN6 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Gm10548-201ENSMUST00000097631 2629 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Gm9062-201ENSMUST00000117712 727 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Gm5369-201ENSMUST00000217499 588 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ddx41Q91VN6 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gm13611-201ENSMUST00000118269 318 ntBASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.63□□□□□ -0.23
Ddx41Q91VN6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms