Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Vps39Q8R5L3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm23270-201ENSMUST00000104055 131 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm13392-201ENSMUST00000117708 150 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm14441-201ENSMUST00000121960 540 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm21769-201ENSMUST00000211922 111 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.88□□□□□ -0.51
Vps39Q8R5L3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm2991-201ENSMUST00000173338 480 ntBASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm5070-201ENSMUST00000177599 862 ntBASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm27046-201ENSMUST00000182160 463 ntBASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm6621-201ENSMUST00000193251 772 ntBASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Vps39Q8R5L3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms