Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Gm2553-201ENSMUST00000215986 605 ntBASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ccdc60Q8C4J0 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Gm8566-201ENSMUST00000120174 465 ntBASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ccdc60Q8C4J0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc60Q8C4J0 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc60Q8C4J0 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc60Q8C4J0 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ccdc60Q8C4J0 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ccdc60Q8C4J0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Gm21811-201ENSMUST00000096485 930 ntBASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc60Q8C4J0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.08■□□□□ 0
Ccdc60Q8C4J0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc60Q8C4J0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms