Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Stard13-201ENSMUST00000062015 5526 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Smco3Q8BQM7 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Mir692-1-201ENSMUST00000102263 109 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm8213-201ENSMUST00000118191 441 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm12203-201ENSMUST00000118235 598 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm13492-201ENSMUST00000119772 665 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm12209-201ENSMUST00000120089 596 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm11597-201ENSMUST00000121423 964 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gm20949-201ENSMUST00000206478 952 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Smco3Q8BQM7 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Plec-206ENSMUST00000074834 14855 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Adcy7-201ENSMUST00000098521 5937 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Smco3Q8BQM7 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms