Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc116Q80X53 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc116Q80X53 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Ccdc116Q80X53 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ccdc116Q80X53 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ccdc116Q80X53 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm22323-201ENSMUST00000103832 109 ntBASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.64□□□□□ -0.55
Ccdc116Q80X53 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm38341-201ENSMUST00000195357 515 ntBASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.64□□□□□ -0.55
Ccdc116Q80X53 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 AA914427-201ENSMUST00000193194 1166 ntBASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Gm37259-201ENSMUST00000193903 849 ntBASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.63□□□□□ -0.55
Ccdc116Q80X53 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.63□□□□□ -0.55
Ccdc116Q80X53 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms