Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Gm42748-201ENSMUST00000199354 2341 ntBASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Defa-ps4-201ENSMUST00000118021 183 ntBASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm3508-201ENSMUST00000186012 792 ntBASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm45118-201ENSMUST00000208928 825 ntBASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdh19Q80TF3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm12036-201ENSMUST00000120008 530 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Mir3547-201ENSMUST00000175461 88 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm29499-201ENSMUST00000189151 486 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm28329-201ENSMUST00000191208 689 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm29171-201ENSMUST00000191397 486 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdh19Q80TF3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms