Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gm11663-201ENSMUST00000117888 290 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gm14724-201ENSMUST00000118400 537 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gm15131-201ENSMUST00000119124 595 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gm12164-201ENSMUST00000121695 551 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Map1b-203ENSMUST00000223725 2669 ntBASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pcdh8Q7TSK3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm19459-201ENSMUST00000176240 835 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm9797-202ENSMUST00000218003 294 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Ginm1-202ENSMUST00000065124 300 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Gm5705-201ENSMUST00000066241 711 ntBASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pcdh8Q7TSK3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Pcdh8Q7TSK3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms