Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm4986-201ENSMUST00000119731 549 ntBASIC9.64□□□□□ -0.87
Vma21Q78T54 Gm14832-201ENSMUST00000121289 322 ntBASIC9.64□□□□□ -0.87
Vma21Q78T54 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.64□□□□□ -0.87
Vma21Q78T54 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC9.64□□□□□ -0.87
Vma21Q78T54 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC9.64□□□□□ -0.87
Vma21Q78T54 AC140375.2-201ENSMUST00000225283 584 ntBASIC9.64□□□□□ -0.87
Vma21Q78T54 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Vma21Q78T54 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Vma21Q78T54 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.63□□□□□ -0.87
Vma21Q78T54 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Mospd4-201ENSMUST00000180618 576 ntBASIC9.63□□□□□ -0.87
Vma21Q78T54 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gm43773-201ENSMUST00000198548 2162 ntBASIC9.63□□□□□ -0.87
Vma21Q78T54 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Vma21Q78T54 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.63□□□□□ -0.87
Vma21Q78T54 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC9.62□□□□□ -0.87
Vma21Q78T54 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Vma21Q78T54 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms