Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm12857-201ENSMUST00000117678 592 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm10051-201ENSMUST00000145209 414 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm8100-201ENSMUST00000182906 988 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm5733-201ENSMUST00000190232 939 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm10288-201ENSMUST00000084614 537 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm10702-201ENSMUST00000098929 1268 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Shc4Q6S5L9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Rubie-203ENSMUST00000227803 2430 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm26286-201ENSMUST00000104166 134 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm7851-201ENSMUST00000117574 323 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm14724-201ENSMUST00000118400 537 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm13045-201ENSMUST00000119019 712 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm15131-201ENSMUST00000119124 595 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm28686-201ENSMUST00000187404 609 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm2965-201ENSMUST00000198365 343 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Shc4Q6S5L9 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms