Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Rnf220Q6PDX6 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm43143-201ENSMUST00000196083 2023 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm43112-201ENSMUST00000196665 3122 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm5403-201ENSMUST00000117105 2795 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm10417-201ENSMUST00000194341 3522 ntBASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 AC164092.1-201ENSMUST00000215635 2232 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Rnf220Q6PDX6 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm16479-201ENSMUST00000121706 932 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm2231-201ENSMUST00000125661 612 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm12091-201ENSMUST00000146791 830 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm23363-201ENSMUST00000175024 79 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm37042-201ENSMUST00000193816 581 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.22□□□□□ -0.61
Rnf220Q6PDX6 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms