Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Ift88Q61371 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC13.09□□□□□ -0.31
Ift88Q61371 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ift88Q61371 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.08□□□□□ -0.31
Ift88Q61371 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ift88Q61371 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ift88Q61371 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Gm13829-201ENSMUST00000119600 138 ntBASIC13.08□□□□□ -0.32
Ift88Q61371 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13.08□□□□□ -0.32
Ift88Q61371 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC13.08□□□□□ -0.32
Ift88Q61371 Gm6013-201ENSMUST00000212264 699 ntBASIC13.08□□□□□ -0.32
Ift88Q61371 Gm19309-201ENSMUST00000218295 205 ntBASIC13.08□□□□□ -0.32
Ift88Q61371 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.08□□□□□ -0.32
Ift88Q61371 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ift88Q61371 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Ift88Q61371 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ift88Q61371 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
Ift88Q61371 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ift88Q61371 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC13.08□□□□□ -0.32
Ift88Q61371 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ift88Q61371 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.08□□□□□ -0.32
Ift88Q61371 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ift88Q61371 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ift88Q61371 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.07□□□□□ -0.32
Ift88Q61371 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ift88Q61371 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.07□□□□□ -0.32
Ift88Q61371 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.07□□□□□ -0.32
Ift88Q61371 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.07□□□□□ -0.32
Ift88Q61371 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Gm7046-201ENSMUST00000221351 977 ntBASIC13.07□□□□□ -0.32
Ift88Q61371 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ift88Q61371 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Ift88Q61371 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
Ift88Q61371 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Ift88Q61371 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ift88Q61371 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.07□□□□□ -0.32
Ift88Q61371 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ift88Q61371 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ift88Q61371 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC13.06□□□□□ -0.32
Ift88Q61371 Gm14644-201ENSMUST00000116671 647 ntBASIC13.06□□□□□ -0.32
Ift88Q61371 Gm11989-201ENSMUST00000117240 672 ntBASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms