Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Col11a1Q61245 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 Gm8302-201ENSMUST00000119217 852 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 Gm6758-201ENSMUST00000119643 1055 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC13.02□□□□□ -0.32
Col11a1Q61245 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC13.02□□□□□ -0.32
Col11a1Q61245 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 Gm37207-201ENSMUST00000194284 296 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 AC122024.3-201ENSMUST00000217719 294 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 Gm28424-201ENSMUST00000187393 1319 ntBASIC13.02□□□□□ -0.32
Col11a1Q61245 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col11a1Q61245 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col11a1Q61245 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col11a1Q61245 AC138329.2-201ENSMUST00000225579 1842 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm13286-201ENSMUST00000117750 537 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm14113-201ENSMUST00000121399 976 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm25343-201ENSMUST00000157460 107 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col11a1Q61245 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm19013-201ENSMUST00000183895 1222 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm19014-201ENSMUST00000184828 1189 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Ighv5-8-202ENSMUST00000191967 337 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 CT025689.1-201ENSMUST00000225214 283 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col11a1Q61245 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col11a1Q61245 Gm25580-201ENSMUST00000083409 327 ntBASIC13.02□□□□□ -0.33
Col11a1Q61245 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col11a1Q61245 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col11a1Q61245 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 AC159810.1-201ENSMUST00000214838 1480 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Pdzk1ip1-202ENSMUST00000106548 887 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm29304-201ENSMUST00000186555 695 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm29223-201ENSMUST00000188867 695 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm37921-201ENSMUST00000194333 695 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm38314-201ENSMUST00000195709 625 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm7939-201ENSMUST00000201233 1050 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.01□□□□□ -0.33
Col11a1Q61245 BC080696-201ENSMUST00000202858 1218 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Gm18065-201ENSMUST00000221395 526 ntBASIC13.01□□□□□ -0.33
Col11a1Q61245 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col11a1Q61245 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.01□□□□□ -0.33
Col11a1Q61245 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col11a1Q61245 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Col11a1Q61245 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC13□□□□□ -0.33
Col11a1Q61245 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Gm14052-201ENSMUST00000121434 1031 ntBASIC13□□□□□ -0.33
Col11a1Q61245 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col11a1Q61245 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13□□□□□ -0.33
Col11a1Q61245 Mir6973a-201ENSMUST00000183646 78 ntBASIC13□□□□□ -0.33
Col11a1Q61245 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col11a1Q61245 Gm35960-201ENSMUST00000202712 767 ntBASIC13□□□□□ -0.33
Col11a1Q61245 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC13□□□□□ -0.33
Col11a1Q61245 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC13□□□□□ -0.33
Col11a1Q61245 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC13□□□□□ -0.33
Col11a1Q61245 Gm5178-201ENSMUST00000219380 898 ntBASIC13□□□□□ -0.33
Col11a1Q61245 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Col11a1Q61245 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms