Protein–RNA interactions for Protein: Q02085

Snai1, Zinc finger protein SNAI1, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snai1Q02085 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.35□□□□□ -0.11
Snai1Q02085 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snai1Q02085 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Snai1Q02085 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snai1Q02085 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Snai1Q02085 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Snai1Q02085 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm24791-201ENSMUST00000104284 131 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm12194-201ENSMUST00000117756 1012 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm4895-201ENSMUST00000181646 1137 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm7902-201ENSMUST00000198842 947 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 Gm3433-201ENSMUST00000210149 1058 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm6390-201ENSMUST00000215034 589 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC14.34□□□□□ -0.11
Snai1Q02085 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 CT573086.4-201ENSMUST00000226729 342 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm9415-201ENSMUST00000200462 1321 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Snai1Q02085 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.34□□□□□ -0.11
Snai1Q02085 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.33□□□□□ -0.11
Snai1Q02085 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.33□□□□□ -0.11
Snai1Q02085 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Gm15003-201ENSMUST00000118884 446 ntBASIC14.33□□□□□ -0.12
Snai1Q02085 Gm14213-201ENSMUST00000119778 768 ntBASIC14.33□□□□□ -0.12
Snai1Q02085 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Snai1Q02085 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Snai1Q02085 Gm23694-201ENSMUST00000179335 110 ntBASIC14.33□□□□□ -0.12
Snai1Q02085 Gm7719-201ENSMUST00000182374 975 ntBASIC14.33□□□□□ -0.12
Snai1Q02085 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Snai1Q02085 Gm42599-201ENSMUST00000201308 469 ntBASIC14.33□□□□□ -0.12
Snai1Q02085 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Mt1-202ENSMUST00000211807 1085 ntBASIC14.33□□□□□ -0.12
Snai1Q02085 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Snai1Q02085 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Snai1Q02085 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Snai1Q02085 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Snai1Q02085 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Snai1Q02085 Gm15036-201ENSMUST00000118880 400 ntBASIC14.32□□□□□ -0.12
Snai1Q02085 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC14.32□□□□□ -0.12
Snai1Q02085 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Snai1Q02085 Gm6548-201ENSMUST00000167498 1165 ntBASIC14.32□□□□□ -0.12
Snai1Q02085 Gm27390-201ENSMUST00000184516 176 ntBASIC14.32□□□□□ -0.12
Snai1Q02085 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Snai1Q02085 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms