Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lig3P97386 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Lig3P97386 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Lig3P97386 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lig3P97386 Gm37600-201ENSMUST00000193764 3292 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Gm14460-201ENSMUST00000121511 639 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Gm11675-201ENSMUST00000121873 832 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Gm24845-201ENSMUST00000158034 109 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Gm27627-201ENSMUST00000183644 150 ntBASIC13.03□□□□□ -0.32
Lig3P97386 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
Lig3P97386 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.03□□□□□ -0.32
Lig3P97386 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.03□□□□□ -0.32
Lig3P97386 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lig3P97386 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Lig3P97386 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lig3P97386 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
Lig3P97386 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Lig3P97386 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.32
Lig3P97386 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.02□□□□□ -0.32
Lig3P97386 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lig3P97386 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Gm12795-201ENSMUST00000117594 539 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lig3P97386 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.02□□□□□ -0.33
Lig3P97386 Gm14832-201ENSMUST00000121289 322 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.02□□□□□ -0.33
Lig3P97386 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Lig3P97386 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lig3P97386 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lig3P97386 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Gm17391-201ENSMUST00000171036 126 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.02□□□□□ -0.33
Lig3P97386 AC124457.1-201ENSMUST00000198845 120 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Gm19187-201ENSMUST00000206781 892 ntBASIC13.02□□□□□ -0.33
Lig3P97386 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.02□□□□□ -0.33
Lig3P97386 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.02□□□□□ -0.33
Lig3P97386 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.02□□□□□ -0.33
Lig3P97386 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Lig3P97386 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lig3P97386 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms