Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Irf5P56477 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC14.24□□□□□ -0.13
Irf5P56477 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Irf5P56477 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC14.24□□□□□ -0.13
Irf5P56477 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Irf5P56477 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Irf5P56477 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Gm6580-201ENSMUST00000117504 1357 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Gm8872-201ENSMUST00000197475 1341 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.23□□□□□ -0.13
Irf5P56477 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Irf5P56477 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC14.23□□□□□ -0.13
Irf5P56477 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC14.23□□□□□ -0.13
Irf5P56477 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC14.23□□□□□ -0.13
Irf5P56477 Gm9540-201ENSMUST00000188230 478 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Gm43962-201ENSMUST00000203898 190 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Gm7600-201ENSMUST00000209657 785 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Irf5P56477 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Irf5P56477 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Irf5P56477 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Irf5P56477 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.23□□□□□ -0.13
Irf5P56477 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Irf5P56477 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Irf5P56477 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC14.22□□□□□ -0.13
Irf5P56477 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Irf5P56477 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.22□□□□□ -0.13
Irf5P56477 Gm14058-201ENSMUST00000116082 735 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Gm11989-201ENSMUST00000117240 672 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Gm14740-201ENSMUST00000118538 1150 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Gm11362-201ENSMUST00000118838 850 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Gm12029-201ENSMUST00000120073 832 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Irf5P56477 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Gm5708-201ENSMUST00000196289 886 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Gm43916-201ENSMUST00000205062 967 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC14.22□□□□□ -0.13
Irf5P56477 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Irf5P56477 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.22□□□□□ -0.13
Irf5P56477 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Irf5P56477 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms