Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.46□□□□□ -0.41
NcanP55066 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.46□□□□□ -0.41
NcanP55066 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.46□□□□□ -0.41
NcanP55066 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
NcanP55066 Ighv1-56-201ENSMUST00000103527 294 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
NcanP55066 Gm23769-201ENSMUST00000104441 121 ntBASIC12.46□□□□□ -0.41
NcanP55066 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
NcanP55066 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Gm13039-201ENSMUST00000118638 794 ntBASIC12.46□□□□□ -0.41
NcanP55066 Gm15549-201ENSMUST00000121595 622 ntBASIC12.46□□□□□ -0.41
NcanP55066 AA623943-201ENSMUST00000121794 354 ntBASIC12.46□□□□□ -0.41
NcanP55066 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.46□□□□□ -0.41
NcanP55066 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
NcanP55066 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.46□□□□□ -0.41
NcanP55066 Gm9192-201ENSMUST00000183221 985 ntBASIC12.46□□□□□ -0.41
NcanP55066 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.46□□□□□ -0.41
NcanP55066 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.46□□□□□ -0.41
NcanP55066 Gm7939-201ENSMUST00000201233 1050 ntBASIC12.46□□□□□ -0.41
NcanP55066 BC080696-201ENSMUST00000202858 1218 ntBASIC12.46□□□□□ -0.41
NcanP55066 Gm19228-201ENSMUST00000214030 717 ntBASIC12.46□□□□□ -0.41
NcanP55066 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC12.46□□□□□ -0.41
NcanP55066 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
NcanP55066 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
NcanP55066 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
NcanP55066 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NcanP55066 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NcanP55066 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NcanP55066 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.46□□□□□ -0.42
NcanP55066 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NcanP55066 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NcanP55066 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NcanP55066 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NcanP55066 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NcanP55066 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NcanP55066 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
NcanP55066 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC12.45□□□□□ -0.42
NcanP55066 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.45□□□□□ -0.42
NcanP55066 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NcanP55066 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Gm23612-201ENSMUST00000103823 110 ntBASIC12.45□□□□□ -0.42
NcanP55066 Gm22661-201ENSMUST00000104192 132 ntBASIC12.45□□□□□ -0.42
NcanP55066 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NcanP55066 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Gm27956-201ENSMUST00000175604 260 ntBASIC12.45□□□□□ -0.42
NcanP55066 Gm26272-201ENSMUST00000179241 132 ntBASIC12.45□□□□□ -0.42
NcanP55066 Gm23576-201ENSMUST00000179918 110 ntBASIC12.45□□□□□ -0.42
NcanP55066 Lockd-205ENSMUST00000185152 496 ntTSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NcanP55066 Gm17944-201ENSMUST00000186351 643 ntBASIC12.45□□□□□ -0.42
NcanP55066 Gm6606-201ENSMUST00000193613 947 ntBASIC12.45□□□□□ -0.42
NcanP55066 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC12.45□□□□□ -0.42
NcanP55066 Gm5996-201ENSMUST00000211110 718 ntBASIC12.45□□□□□ -0.42
NcanP55066 CT010480.2-201ENSMUST00000225424 737 ntBASIC12.45□□□□□ -0.42
NcanP55066 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NcanP55066 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NcanP55066 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NcanP55066 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.44□□□□□ -0.42
NcanP55066 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
NcanP55066 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NcanP55066 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms