Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Sox3P53784 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Gm7851-201ENSMUST00000117574 323 ntBASIC11.41□□□□□ -0.58
Sox3P53784 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Sox3P53784 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Gm9630-201ENSMUST00000178304 885 ntBASIC11.41□□□□□ -0.58
Sox3P53784 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Gm27390-201ENSMUST00000184516 176 ntBASIC11.41□□□□□ -0.58
Sox3P53784 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
Sox3P53784 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.41□□□□□ -0.58
Sox3P53784 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.41□□□□□ -0.58
Sox3P53784 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.41□□□□□ -0.58
Sox3P53784 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.41□□□□□ -0.58
Sox3P53784 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.41□□□□□ -0.58
Sox3P53784 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.41□□□□□ -0.58
Sox3P53784 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Sox3P53784 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Sox3P53784 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Gm14999-201ENSMUST00000121039 624 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Gm23218-201ENSMUST00000158124 276 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Gm22138-201ENSMUST00000158748 128 ntBASIC11.4□□□□□ -0.58
Sox3P53784 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Gm8018-201ENSMUST00000173536 789 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Gm6771-201ENSMUST00000182716 1001 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Gm6867-201ENSMUST00000219165 425 ntBASIC11.4□□□□□ -0.58
Sox3P53784 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.4□□□□□ -0.58
Sox3P53784 CT030637.1-201ENSMUST00000228016 669 ntBASIC11.4□□□□□ -0.58
Sox3P53784 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.4□□□□□ -0.58
Sox3P53784 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
Sox3P53784 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.4□□□□□ -0.58
Sox3P53784 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Sox3P53784 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.4□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms