Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sox1P53783 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Gm25562-201ENSMUST00000104608 133 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Mir874-201ENSMUST00000104769 76 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox1P53783 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.14□□□□□ -0.47
Sox1P53783 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Gm14497-201ENSMUST00000119537 580 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.14□□□□□ -0.47
Sox1P53783 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Gm26272-201ENSMUST00000179241 132 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Gm38151-201ENSMUST00000195085 289 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.14□□□□□ -0.47
Sox1P53783 AC129975.1-201ENSMUST00000224816 592 ntBASIC12.14□□□□□ -0.47
Sox1P53783 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox1P53783 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox1P53783 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Sox1P53783 Gm5449-201ENSMUST00000081132 357 ntBASIC12.14□□□□□ -0.47
Sox1P53783 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.14□□□□□ -0.47
Sox1P53783 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sox1P53783 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox1P53783 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Sox1P53783 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.13□□□□□ -0.47
Sox1P53783 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox1P53783 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox1P53783 Gm13281-201ENSMUST00000120871 567 ntBASIC12.13□□□□□ -0.47
Sox1P53783 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.13□□□□□ -0.47
Sox1P53783 C030013C21Rik-201ENSMUST00000133400 795 ntTSL 3 BASIC12.13□□□□□ -0.47
Sox1P53783 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.13□□□□□ -0.47
Sox1P53783 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Gm18010-201ENSMUST00000203553 202 ntBASIC12.13□□□□□ -0.47
Sox1P53783 Gm45113-201ENSMUST00000207518 165 ntBASIC12.13□□□□□ -0.47
Sox1P53783 Gm5650-201ENSMUST00000209641 598 ntBASIC12.13□□□□□ -0.47
Sox1P53783 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.13□□□□□ -0.47
Sox1P53783 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Sox1P53783 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Sox1P53783 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.12□□□□□ -0.47
Sox1P53783 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sox1P53783 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms