Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mir6420-201ENSMUST00000185032 102 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm43118-201ENSMUST00000199149 775 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Olfr284-202ENSMUST00000206647 966 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm18935-201ENSMUST00000212692 664 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm7399-201ENSMUST00000032395 858 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rfx3P48381 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rfx3P48381 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Rfx3P48381 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Rfx3P48381 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 AC167669.2-201ENSMUST00000224417 1620 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.73□□□□□ -0.69
Rfx3P48381 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Rfx3P48381 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.72□□□□□ -0.69
Rfx3P48381 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfx3P48381 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Rfx3P48381 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.72□□□□□ -0.69
Rfx3P48381 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Gm43963-201ENSMUST00000203466 2488 ntBASIC10.72□□□□□ -0.69
Rfx3P48381 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rfx3P48381 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.72□□□□□ -0.69
Rfx3P48381 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Gm11531-201ENSMUST00000117614 555 ntBASIC10.72□□□□□ -0.69
Rfx3P48381 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC10.72□□□□□ -0.69
Rfx3P48381 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC10.72□□□□□ -0.69
Rfx3P48381 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Rfx3P48381 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.72□□□□□ -0.69
Rfx3P48381 Gm43179-201ENSMUST00000198797 275 ntBASIC10.72□□□□□ -0.69
Rfx3P48381 Gm18711-201ENSMUST00000199341 750 ntBASIC10.72□□□□□ -0.69
Rfx3P48381 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.72□□□□□ -0.69
Rfx3P48381 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.72□□□□□ -0.69
Rfx3P48381 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rfx3P48381 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Rfx3P48381 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Rfx3P48381 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.72□□□□□ -0.69
Rfx3P48381 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Rfx3P48381 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.71□□□□□ -0.69
Rfx3P48381 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.71□□□□□ -0.69
Rfx3P48381 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.71□□□□□ -0.69
Rfx3P48381 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.71□□□□□ -0.69
Rfx3P48381 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC10.71□□□□□ -0.69
Rfx3P48381 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC10.71□□□□□ -0.69
Rfx3P48381 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC10.71□□□□□ -0.69
Rfx3P48381 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Rfx3P48381 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms