Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
Chd1P40201 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC17.39■□□□□ 0.37
Chd1P40201 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC17.39■□□□□ 0.37
Chd1P40201 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Chd1P40201 Gm28671-201ENSMUST00000187036 692 ntBASIC17.39■□□□□ 0.37
Chd1P40201 Gm9619-201ENSMUST00000211587 762 ntBASIC17.39■□□□□ 0.37
Chd1P40201 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.39■□□□□ 0.37
Chd1P40201 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chd1P40201 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Chd1P40201 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Chd1P40201 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Chd1P40201 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC17.38■□□□□ 0.37
Chd1P40201 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Chd1P40201 AC153153.1-201ENSMUST00000225803 793 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm16477-201ENSMUST00000085365 801 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm17415-201ENSMUST00000096427 789 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Chd1P40201 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Chd1P40201 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC17.38■□□□□ 0.37
Chd1P40201 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 AC138329.2-201ENSMUST00000225579 1842 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Gm43242-201ENSMUST00000199507 1776 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Mir598-201ENSMUST00000102094 79 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Gm12028-201ENSMUST00000118065 436 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC17.38■□□□□ 0.37
Chd1P40201 Snord55-201ENSMUST00000174939 79 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm27675-201ENSMUST00000184527 94 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm44917-201ENSMUST00000208798 520 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC17.38■□□□□ 0.37
Chd1P40201 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Chd1P40201 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Chd1P40201 Nudt13-207ENSMUST00000224311 1574 ntBASIC17.38■□□□□ 0.37
Chd1P40201 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Chd1P40201 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Chd1P40201 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC17.37■□□□□ 0.37
Chd1P40201 Gm12435-201ENSMUST00000118949 1016 ntBASIC17.37■□□□□ 0.37
Chd1P40201 Spata3-205ENSMUST00000130504 1100 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC17.37■□□□□ 0.37
Chd1P40201 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC17.37■□□□□ 0.37
Chd1P40201 Mcu-201ENSMUST00000009791 1079 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC17.37■□□□□ 0.37
Chd1P40201 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Chd1P40201 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC17.36■□□□□ 0.37
Chd1P40201 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Chd1P40201 Gm40332-201ENSMUST00000199847 938 ntBASIC17.36■□□□□ 0.37
Chd1P40201 Gm44124-201ENSMUST00000204159 472 ntBASIC17.36■□□□□ 0.37
Chd1P40201 Gm18041-201ENSMUST00000218210 618 ntBASIC17.36■□□□□ 0.37
Chd1P40201 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Chd1P40201 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC17.36■□□□□ 0.37
Chd1P40201 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Chd1P40201 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms