Protein–RNA interactions for Protein: P28867

Prkcd, Protein kinase C delta type, mousemouse

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcdP28867 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.73□□□□□ -0.53
PrkcdP28867 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
PrkcdP28867 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PrkcdP28867 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
PrkcdP28867 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
PrkcdP28867 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Gm10434-201ENSMUST00000101158 471 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PrkcdP28867 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Mir1247-201ENSMUST00000116706 82 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Gm11478-201ENSMUST00000117851 599 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.72□□□□□ -0.53
PrkcdP28867 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.72□□□□□ -0.53
PrkcdP28867 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PrkcdP28867 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
PrkcdP28867 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.72□□□□□ -0.53
PrkcdP28867 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.72□□□□□ -0.53
PrkcdP28867 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
PrkcdP28867 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.71□□□□□ -0.53
PrkcdP28867 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PrkcdP28867 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PrkcdP28867 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
PrkcdP28867 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.71□□□□□ -0.53
PrkcdP28867 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
PrkcdP28867 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.71□□□□□ -0.53
PrkcdP28867 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.71□□□□□ -0.53
PrkcdP28867 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
PrkcdP28867 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
PrkcdP28867 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
PrkcdP28867 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
PrkcdP28867 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.71□□□□□ -0.54
PrkcdP28867 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
PrkcdP28867 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
PrkcdP28867 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
PrkcdP28867 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
PrkcdP28867 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.7□□□□□ -0.54
PrkcdP28867 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms