Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Nckap1P28660 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Nckap1P28660 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.84□□□□□ -0.51
Nckap1P28660 Gm11956-201ENSMUST00000119525 512 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 Gm14460-201ENSMUST00000121511 639 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.84□□□□□ -0.51
Nckap1P28660 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Mir7032-201ENSMUST00000185154 79 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nckap1P28660 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nckap1P28660 Matn2-203ENSMUST00000226766 3252 ntBASIC11.84□□□□□ -0.51
Nckap1P28660 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Nckap1P28660 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nckap1P28660 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nckap1P28660 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
Nckap1P28660 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nckap1P28660 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
Nckap1P28660 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.83□□□□□ -0.52
Nckap1P28660 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.83□□□□□ -0.52
Nckap1P28660 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Nckap1P28660 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nckap1P28660 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.83□□□□□ -0.52
Nckap1P28660 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.83□□□□□ -0.52
Nckap1P28660 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.83□□□□□ -0.52
Nckap1P28660 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nckap1P28660 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nckap1P28660 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.83□□□□□ -0.52
Nckap1P28660 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nckap1P28660 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nckap1P28660 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nckap1P28660 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nckap1P28660 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms