Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.29□□□□□ -0.28
Col2a1P28481 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm3671-201ENSMUST00000182463 1007 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm16380-201ENSMUST00000077997 478 ntBASIC13.29□□□□□ -0.28
Col2a1P28481 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Col2a1P28481 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Col2a1P28481 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.28□□□□□ -0.28
Col2a1P28481 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Gm25053-201ENSMUST00000103982 133 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm25922-201ENSMUST00000104281 130 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm8111-201ENSMUST00000117659 987 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm13422-201ENSMUST00000118834 504 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm9673-201ENSMUST00000119287 781 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm13284-201ENSMUST00000121020 547 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Gm24679-201ENSMUST00000158762 111 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm25053-202ENSMUST00000199731 132 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC13.28□□□□□ -0.28
Col2a1P28481 Gm5599-201ENSMUST00000209602 788 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.28□□□□□ -0.28
Col2a1P28481 AC153152.3-201ENSMUST00000222188 1135 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Col2a1P28481 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Col2a1P28481 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Col2a1P28481 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Col2a1P28481 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Col2a1P28481 Gm45416-201ENSMUST00000209713 2201 ntBASIC13.28□□□□□ -0.28
Col2a1P28481 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Col2a1P28481 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Col2a1P28481 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
Col2a1P28481 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Col2a1P28481 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.27□□□□□ -0.28
Col2a1P28481 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.27□□□□□ -0.28
Col2a1P28481 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Col2a1P28481 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.27□□□□□ -0.29
Col2a1P28481 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Col2a1P28481 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms