Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm19287-201ENSMUST00000203190 358 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Nfkb1P25799 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.22□□□□□ -0.45
Nfkb1P25799 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.22□□□□□ -0.45
Nfkb1P25799 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nfkb1P25799 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nfkb1P25799 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm15207-201ENSMUST00000119259 442 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Nfkb1P25799 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.21□□□□□ -0.45
Nfkb1P25799 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nfkb1P25799 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nfkb1P25799 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.21□□□□□ -0.46
Nfkb1P25799 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nfkb1P25799 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm12579-201ENSMUST00000118040 783 ntBASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm15566-201ENSMUST00000121130 590 ntBASIC12.2□□□□□ -0.46
Nfkb1P25799 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Gm43916-201ENSMUST00000205062 967 ntBASIC12.2□□□□□ -0.46
Nfkb1P25799 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
Nfkb1P25799 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.2□□□□□ -0.46
Nfkb1P25799 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms