Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Stx1aO35526 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Stx1aO35526 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Stx1aO35526 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.29□□□□□ -0.28
Stx1aO35526 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Mir1247-201ENSMUST00000116706 82 ntBASIC13.29□□□□□ -0.28
Stx1aO35526 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC13.29□□□□□ -0.28
Stx1aO35526 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Gm18893-201ENSMUST00000198416 943 ntBASIC13.29□□□□□ -0.28
Stx1aO35526 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Stx1aO35526 Gm21939-201ENSMUST00000221137 2773 ntBASIC13.29□□□□□ -0.28
Stx1aO35526 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Stx1aO35526 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Stx1aO35526 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Stx1aO35526 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Stx1aO35526 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.28□□□□□ -0.28
Stx1aO35526 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Stx1aO35526 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Gm10434-201ENSMUST00000101158 471 ntBASIC13.28□□□□□ -0.28
Stx1aO35526 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Gm6023-201ENSMUST00000118217 606 ntBASIC13.28□□□□□ -0.28
Stx1aO35526 Gm11960-201ENSMUST00000122068 925 ntBASIC13.28□□□□□ -0.28
Stx1aO35526 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Stx1aO35526 AC154462.2-201ENSMUST00000227519 370 ntBASIC13.28□□□□□ -0.28
Stx1aO35526 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.28□□□□□ -0.28
Stx1aO35526 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Stx1aO35526 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Stx1aO35526 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.28□□□□□ -0.28
Stx1aO35526 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Stx1aO35526 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.27□□□□□ -0.28
Stx1aO35526 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Stx1aO35526 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Stx1aO35526 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Stx1aO35526 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Stx1aO35526 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Stx1aO35526 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms