Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.14□□□□□ -0.95
MsmbO08540 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
MsmbO08540 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Gm12201-201ENSMUST00000120657 1234 ntBASIC9.14□□□□□ -0.95
MsmbO08540 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC9.14□□□□□ -0.95
MsmbO08540 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC9.14□□□□□ -0.95
MsmbO08540 Gm9136-201ENSMUST00000193368 454 ntBASIC9.14□□□□□ -0.95
MsmbO08540 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
MsmbO08540 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
MsmbO08540 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
MsmbO08540 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC9.14□□□□□ -0.95
MsmbO08540 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
MsmbO08540 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.13□□□□□ -0.95
MsmbO08540 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Gm12566-201ENSMUST00000121479 359 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC9.13□□□□□ -0.95
MsmbO08540 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
MsmbO08540 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC9.13□□□□□ -0.95
MsmbO08540 Gm17040-202ENSMUST00000170597 889 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.13□□□□□ -0.95
MsmbO08540 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC9.13□□□□□ -0.95
MsmbO08540 Gm34767-201ENSMUST00000191813 1062 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC9.13□□□□□ -0.95
MsmbO08540 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC9.13□□□□□ -0.95
MsmbO08540 Gm8956-201ENSMUST00000203939 825 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
MsmbO08540 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.13□□□□□ -0.95
MsmbO08540 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC9.13□□□□□ -0.95
MsmbO08540 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
MsmbO08540 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms