Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdh9F8VPK8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh9F8VPK8 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh9F8VPK8 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdh9F8VPK8 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Gm38055-201ENSMUST00000195353 2217 ntBASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdh9F8VPK8 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm15198-201ENSMUST00000117283 177 ntBASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm14726-201ENSMUST00000120623 896 ntBASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm3096-201ENSMUST00000185770 364 ntBASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm31256-201ENSMUST00000194705 506 ntBASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm19287-201ENSMUST00000203190 358 ntBASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdh9F8VPK8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms