Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Pcdh1F7BJK1 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm11425-201ENSMUST00000119608 498 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm38314-201ENSMUST00000195709 625 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm19994-201ENSMUST00000217086 586 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm9396-201ENSMUST00000076703 567 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Pcdh1F7BJK1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Mir1982-201ENSMUST00000157368 74 ntBASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Snora78-201ENSMUST00000158630 128 ntBASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 Gm8565-201ENSMUST00000183259 1014 ntBASIC10.67□□□□□ -0.7
Pcdh1F7BJK1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms