Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.75□□□□□ -0.53
Srp54bE9PXC0 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm12208-201ENSMUST00000122004 163 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm5714-201ENSMUST00000197343 566 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm13910-201ENSMUST00000121752 1428 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Srp54bE9PXC0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm29499-201ENSMUST00000189151 486 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm28329-201ENSMUST00000191208 689 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm29171-201ENSMUST00000191397 486 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm45550-201ENSMUST00000209380 946 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Srp54bE9PXC0 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms