Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb1A2AQ07 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.13□□□□□ -0.47
Tubb1A2AQ07 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.13□□□□□ -0.47
Tubb1A2AQ07 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.13□□□□□ -0.47
Tubb1A2AQ07 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb1A2AQ07 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Tubb1A2AQ07 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm14723-201ENSMUST00000118686 215 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm38266-201ENSMUST00000194931 421 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm43002-201ENSMUST00000200310 155 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm19287-201ENSMUST00000203190 358 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Tubb1A2AQ07 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.11□□□□□ -0.47
Tubb1A2AQ07 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm25700-201ENSMUST00000177693 110 ntBASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm38317-201ENSMUST00000195564 343 ntBASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gm5186-201ENSMUST00000218781 920 ntBASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Tubb1A2AQ07 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Tubb1A2AQ07 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms